MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Shigella flexneri
19428wH2_1568
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 237
bases: 5,139,722 bps
CDS: 5,034
rRNA: 13
tRNA: 87
tmRNA: 1
Total number of protein coding genes annotated/found:
4,833
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5015|JADGKR010000004.1
MBF0739965.1
Genome Viewer
NA
AA
933/311
198073-197141
p-hydroxybenzoic acid efflux pump subunit AaeA
SEQF5015|JADGKR010000004.1
MBF0739964.1
Genome Viewer
NA
AA
1968/656
197135-195168
p-hydroxybenzoic acid efflux pump subunit AaeB
SEQF5015|JADGKR010000004.1
MBF0739967.1
Genome Viewer
NA
AA
930/310
198467-199396
HTH-type transcriptional activator AaeR
SEQF5015|JADGKR010000007.1
MBF0740515.1
Genome Viewer
NA
AA
2160/720
148524-150683
bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase
SEQF5015|JADGKR010000013.1
MBF0741328.1
Genome Viewer
NA
AA
705/235
57200-57904
leucyl/phenylalanyl-tRNA--protein transferase
SEQF5015|JADGKR010000003.1
MBF0739726.1
Genome Viewer
NA
AA
1311/437
201572-200262
p-aminobenzoyl-glutamate hydrolase subunit AbgA
SEQF5015|JADGKR010000003.1
MBF0739725.1
Genome Viewer
NA
AA
1446/482
200262-198817
p-aminobenzoyl-glutamate hydrolase subunit AbgB
SEQF5015|JADGKR010000003.1
MBF0739724.1
Genome Viewer
NA
AA
1527/509
198780-197254
p-aminobenzoyl-glutamate transporter
SEQF5015|JADGKR010000027.1
MBF0742589.1
Genome Viewer
NA
AA
960/320
52160-53119
acetyl-CoA carboxylase carboxyl transferase subunit alpha
SEQF5015|JADGKR010000004.1
MBF0739977.1
Genome Viewer
NA
AA
471/157
214103-214573
acetyl-CoA carboxylase biotin carboxyl carrier protein
SEQF5015|JADGKR010000004.1
MBF0739978.1
Genome Viewer
NA
AA
1350/450
214584-215933
acetyl-CoA carboxylase biotin carboxylase subunit
SEQF5015|JADGKR010000001.1
MBF0739271.1
Genome Viewer
NA
AA
915/305
302430-301516
acetyl-CoA carboxylase%2C carboxyltransferase subunit beta
SEQF5015|JADGKR010000014.1
MBF0741395.1
Genome Viewer
NA
AA
1305/435
3648-4952
isocitrate lyase
SEQF5015|JADGKR010000014.1
MBF0741394.1
Genome Viewer
NA
AA
1602/534
2017-3618
malate synthase A
SEQF5015|JADGKR010000011.1
MBF0741135.1
Genome Viewer
NA
AA
2664/888
123117-125780
pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type
SEQF5015|JADGKR010000196.1
MBF0743813.1
Genome Viewer
NA
AA
408/136
1-409
pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type
SEQF5015|JADGKR010000011.1
MBF0741136.1
Genome Viewer
NA
AA
1893/631
125795-127687
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase
SEQF5015|JADGKR010000014.1
MBF0741396.1
Genome Viewer
NA
AA
1737/579
5233-6969
bifunctional isocitrate dehydrogenase kinase/phosphatase
SEQF5015|JADGKR010000001.1
MBF0739251.1
Genome Viewer
NA
AA
1203/401
281962-283164
acetate kinase
SEQF5015|JADGKR010000003.1
MBF0739662.1
Genome Viewer
NA
AA
2676/892
134158-136833
aconitate hydratase AcnA
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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