MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Actinomyces bowdenii
WMus004.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 457
bases: 3,191,231 bps
CDS: 2,590
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 56
misc RNA:
Total features: 2,650
Total number of protein coding genes annotated/found:
2,590
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5001|JADGKF010000009.1
SEQF5001_02630
Genome Viewer
NA
AA
300/100
2040-2339
hypothetical protein
SEQF5001|JADGKF010000009.1
SEQF5001_02629
Genome Viewer
NA
AA
1176/392
677-1852
hypothetical protein
SEQF5001|JADGKF010000009.1
SEQF5001_02626
Genome Viewer
NA
AA
279/93
69-347
hypothetical protein
SEQF5001|JADGKF010000099.1
SEQF5001_02625
Genome Viewer
NA
AA
645/215
9571-8927
Nucleoside triphosphate pyrophosphatase
SEQF5001|JADGKF010000099.1
SEQF5001_02624
Genome Viewer
NA
AA
747/249
8125-8871
hypothetical protein
SEQF5001|JADGKF010000099.1
SEQF5001_02623
Genome Viewer
NA
AA
1059/353
6557-7615
hypothetical protein
SEQF5001|JADGKF010000099.1
SEQF5001_02622
Genome Viewer
NA
AA
171/57
6258-6428
50S ribosomal protein L33 2
SEQF5001|JADGKF010000099.1
SEQF5001_02618
Genome Viewer
NA
AA
498/166
5585-5088
hypothetical protein
SEQF5001|JADGKF010000099.1
SEQF5001_02617
Genome Viewer
NA
AA
645/215
4422-5066
Oxygen regulatory protein NreC
SEQF5001|JADGKF010000099.1
SEQF5001_02616
Genome Viewer
NA
AA
1269/423
3166-4434
hypothetical protein
SEQF5001|JADGKF010000099.1
SEQF5001_02615
Genome Viewer
NA
AA
294/98
2812-2519
hypothetical protein
SEQF5001|JADGKF010000099.1
SEQF5001_02614
Genome Viewer
NA
AA
1725/575
2422-698
hypothetical protein
SEQF5001|JADGKF010000099.1
SEQF5001_02613
Genome Viewer
NA
AA
219/73
468-686
hypothetical protein
SEQF5001|JADGKF010000098.1
SEQF5001_02612
Genome Viewer
NA
AA
906/302
9331-8426
hypothetical protein
SEQF5001|JADGKF010000098.1
SEQF5001_02611
Genome Viewer
NA
AA
369/123
8337-7969
HTH-type transcriptional regulator CmtR
SEQF5001|JADGKF010000098.1
SEQF5001_02610
Genome Viewer
NA
AA
1905/635
7972-6068
putative cation-transporting ATPase G
SEQF5001|JADGKF010000098.1
SEQF5001_02609
Genome Viewer
NA
AA
822/274
6039-5218
hypothetical protein
SEQF5001|JADGKF010000098.1
SEQF5001_02608
Genome Viewer
NA
AA
348/116
4407-4060
hypothetical protein
SEQF5001|JADGKF010000098.1
SEQF5001_02607
Genome Viewer
NA
AA
1365/455
3442-2078
hypothetical protein
SEQF5001|JADGKF010000098.1
SEQF5001_02606
Genome Viewer
NA
AA
1419/473
498-1916
Protease HtpX
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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