MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus arlettae
19428wH1_IOV5
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 80
bases: 2,607,375 bps
CDS: 2,506
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,580
Total number of protein coding genes annotated/found:
2,506
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5016|JADGMC010000009.1
SEQF5016_02579
Genome Viewer
NA
AA
1269/423
110163-111431
L-threonine dehydratase biosynthetic IlvA
SEQF5016|JADGMC010000009.1
SEQF5016_02578
Genome Viewer
NA
AA
576/192
109552-110127
3-isopropylmalate dehydratase small subunit
SEQF5016|JADGMC010000009.1
SEQF5016_02577
Genome Viewer
NA
AA
1371/457
108180-109550
3-isopropylmalate dehydratase large subunit
SEQF5016|JADGMC010000009.1
SEQF5016_02576
Genome Viewer
NA
AA
1041/347
107124-108164
3-isopropylmalate dehydrogenase
SEQF5016|JADGMC010000009.1
SEQF5016_02575
Genome Viewer
NA
AA
1536/512
105592-107127
2-isopropylmalate synthase
SEQF5016|JADGMC010000009.1
SEQF5016_02574
Genome Viewer
NA
AA
1005/335
104486-105490
Ketol-acid reductoisomerase (NADP(+))
SEQF5016|JADGMC010000009.1
SEQF5016_02573
Genome Viewer
NA
AA
474/158
103963-104436
Acetolactate synthase small subunit
SEQF5016|JADGMC010000009.1
SEQF5016_02572
Genome Viewer
NA
AA
1785/595
102182-103966
Acetolactate synthase large subunit
SEQF5016|JADGMC010000009.1
SEQF5016_02571
Genome Viewer
NA
AA
1689/563
100480-102168
Dihydroxy-acid dehydratase
SEQF5016|JADGMC010000009.1
SEQF5016_02570
Genome Viewer
NA
AA
462/154
100004-99543
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
SEQF5016|JADGMC010000009.1
SEQF5016_02569
Genome Viewer
NA
AA
666/222
99562-98897
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
SEQF5016|JADGMC010000009.1
SEQF5016_02568
Genome Viewer
NA
AA
465/155
98924-98460
[Ribosomal protein S18]-alanine N-acetyltransferase
SEQF5016|JADGMC010000009.1
SEQF5016_02567
Genome Viewer
NA
AA
1026/342
98467-97442
tRNA N6-adenosine threonylcarbamoyltransferase
SEQF5016|JADGMC010000009.1
SEQF5016_02566
Genome Viewer
NA
AA
426/142
97320-96895
hypothetical protein
SEQF5016|JADGMC010000009.1
SEQF5016_02565
Genome Viewer
NA
AA
1599/533
95233-96831
DNA mismatch repair protein MutS
SEQF5016|JADGMC010000009.1
SEQF5016_02564
Genome Viewer
NA
AA
1920/640
92993-94912
putative ABC transporter ATP-binding protein YbiT
SEQF5016|JADGMC010000009.1
SEQF5016_02563
Genome Viewer
NA
AA
642/214
92835-92194
Redox-sensing transcriptional repressor Rex
SEQF5016|JADGMC010000009.1
SEQF5016_02562
Genome Viewer
NA
AA
1095/365
91768-90674
hypothetical protein
SEQF5016|JADGMC010000009.1
SEQF5016_02561
Genome Viewer
NA
AA
225/75
90653-90429
Putative sulfur carrier protein YeeD
SEQF5016|JADGMC010000009.1
SEQF5016_02560
Genome Viewer
NA
AA
960/320
90178-89219
Catabolite control protein A
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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