MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus arlettae
19428wH1_IOV5
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 80
bases: 2,607,375 bps
CDS: 2,506
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,580
Total number of protein coding genes annotated/found:
2,506
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Items 61 - 80
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5016|JADGMC010000010.1
SEQF5016_00061
Genome Viewer
NA
AA
1479/493
59182-60660
putative malate:quinone oxidoreductase 1
SEQF5016|JADGMC010000010.1
SEQF5016_00062
Genome Viewer
NA
AA
1377/459
62118-60742
Heme sensor protein HssS
SEQF5016|JADGMC010000010.1
SEQF5016_00063
Genome Viewer
NA
AA
675/225
62785-62111
Heme response regulator HssR
SEQF5016|JADGMC010000010.1
SEQF5016_00064
Genome Viewer
NA
AA
1053/351
62977-64029
putative ABC transporter permease
SEQF5016|JADGMC010000010.1
SEQF5016_00065
Genome Viewer
NA
AA
669/223
64029-64697
Putative hemin import ATP-binding protein HrtA
SEQF5016|JADGMC010000010.1
SEQF5016_00066
Genome Viewer
NA
AA
975/325
65728-64754
hypothetical protein
SEQF5016|JADGMC010000010.1
SEQF5016_00067
Genome Viewer
NA
AA
462/154
65987-66448
HTH-type transcriptional regulator TcaR
SEQF5016|JADGMC010000010.1
SEQF5016_00068
Genome Viewer
NA
AA
2385/795
68883-66499
Putative membrane protein YdgH
SEQF5016|JADGMC010000010.1
SEQF5016_00069
Genome Viewer
NA
AA
1386/462
69159-70544
Membrane-associated protein TcaA
SEQF5016|JADGMC010000010.1
SEQF5016_00070
Genome Viewer
NA
AA
1191/397
70716-71906
Bicyclomycin resistance protein
SEQF5016|JADGMC010000010.1
SEQF5016_00071
Genome Viewer
NA
AA
549/183
73205-72657
hypothetical protein
SEQF5016|JADGMC010000010.1
SEQF5016_00072
Genome Viewer
NA
AA
648/216
73332-73979
p-hydroxybenzoic acid efflux pump subunit AaeA
SEQF5016|JADGMC010000010.1
SEQF5016_00073
Genome Viewer
NA
AA
1869/623
73992-75860
Putative multidrug resistance protein MdtD
SEQF5016|JADGMC010000010.1
SEQF5016_00074
Genome Viewer
NA
AA
642/214
76947-76306
hypothetical protein
SEQF5016|JADGMC010000010.1
SEQF5016_00075
Genome Viewer
NA
AA
900/300
77221-78120
hypothetical protein
SEQF5016|JADGMC010000010.1
SEQF5016_00076
Genome Viewer
NA
AA
861/287
78408-79268
hypothetical protein
SEQF5016|JADGMC010000010.1
SEQF5016_00077
Genome Viewer
NA
AA
405/135
80030-79626
hypothetical protein
SEQF5016|JADGMC010000010.1
SEQF5016_00078
Genome Viewer
NA
AA
468/156
80511-80044
hypothetical protein
SEQF5016|JADGMC010000010.1
SEQF5016_00079
Genome Viewer
NA
AA
948/316
80634-81581
Cobalt/magnesium transport protein CorA
SEQF5016|JADGMC010000010.1
SEQF5016_00080
Genome Viewer
NA
AA
1041/347
81635-82675
Isopentenyl-diphosphate delta-isomerase
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Items 61 - 80
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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