MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
ACT.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 62
bases: 2,736,455 bps
CDS: 2,710
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,779
Total number of protein coding genes annotated/found:
2,710
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 136 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5014|JADGMB010000016.1
SEQF5014_00003
Genome Viewer
NA
AA
1686/562
4179-2494
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00004
Genome Viewer
NA
AA
822/274
5213-4392
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00006
Genome Viewer
NA
AA
264/88
7272-7009
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00012
Genome Viewer
NA
AA
507/169
13793-13287
Putative phosphoesterase
SEQF5014|JADGMB010000016.1
SEQF5014_00013
Genome Viewer
NA
AA
750/250
14578-13829
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00015
Genome Viewer
NA
AA
1113/371
16591-17703
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00022
Genome Viewer
NA
AA
357/119
25049-24693
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00025
Genome Viewer
NA
AA
795/265
26239-27033
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00027
Genome Viewer
NA
AA
990/330
30367-29378
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00039
Genome Viewer
NA
AA
372/124
44907-45278
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00042
Genome Viewer
NA
AA
204/68
47732-47935
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00045
Genome Viewer
NA
AA
192/64
51782-51973
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00048
Genome Viewer
NA
AA
846/282
53309-54154
Fatty acid-binding protein
SEQF5014|JADGMB010000016.1
SEQF5014_00052
Genome Viewer
NA
AA
345/115
57753-57409
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00053
Genome Viewer
NA
AA
906/302
58865-57960
putative protein
SEQF5014|JADGMB010000016.1
SEQF5014_00054
Genome Viewer
NA
AA
1128/376
60069-58942
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00059
Genome Viewer
NA
AA
615/205
68998-68384
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00060
Genome Viewer
NA
AA
987/329
70160-69174
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00068
Genome Viewer
NA
AA
207/69
79773-79567
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00069
Genome Viewer
NA
AA
594/198
80450-79857
Putative peptidyl-prolyl cis-trans isomerase
Items 1 - 20
🡆
click arrow to navigate by page or
of 136 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
