MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus danieliae
STR.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 263
bases: 1,967,238 bps
CDS: 1,968
rRNA: 12
tRNA: 73
tmRNA: 1
Total number of protein coding genes annotated/found:
1,899
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5003|JADGKG010000001.1
MBF0698430.1
Genome Viewer
NA
AA
221/73
1-223
helix-turn-helix domain-containing protein
SEQF5003|JADGKG010000002.1
MBF0698431.1
Genome Viewer
NA
AA
241/80
1-243
group II intron reverse transcriptase/maturase
SEQF5003|JADGKG010000006.1
MBF0698432.1
Genome Viewer
NA
AA
85/28
165-249
maturase
SEQF5003|JADGKG010000007.1
MBF0698433.1
Genome Viewer
NA
AA
138/46
250-113
group II intron reverse transcriptase/maturase
SEQF5003|JADGKG010000011.1
MBF0698434.1
Genome Viewer
NA
AA
255/85
1-255
hypothetical protein
SEQF5003|JADGKG010000015.1
MBF0698435.1
Genome Viewer
NA
AA
132/44
278-147
IS30 family transposase
SEQF5003|JADGKG010000016.1
MBF0698436.1
Genome Viewer
NA
AA
313/104
315-1
transposase
SEQF5003|JADGKG010000017.1
MBF0698437.1
Genome Viewer
NA
AA
322/107
324-1
hypothetical protein
SEQF5003|JADGKG010000018.1
MBF0698438.1
Genome Viewer
NA
AA
340/113
1-340
transposase family protein
SEQF5003|JADGKG010000020.1
MBF0698439.1
Genome Viewer
NA
AA
132/44
1-132
IS30 family transposase
SEQF5003|JADGKG010000022.1
MBF0698440.1
Genome Viewer
NA
AA
499/166
499-1
transposase
SEQF5003|JADGKG010000022.1
MBF0698441.1
Genome Viewer
NA
AA
2235/745
2916-682
single-stranded-DNA-specific exonuclease RecJ
SEQF5003|JADGKG010000022.1
MBF0698442.1
Genome Viewer
NA
AA
930/310
3860-2931
ribonuclease Z
SEQF5003|JADGKG010000022.1
MBF0698443.1
Genome Viewer
NA
AA
654/218
4495-3842
cystathionine beta-lyase
SEQF5003|JADGKG010000022.1
MBF0698444.1
Genome Viewer
NA
AA
1239/413
5726-4488
GTPase HflX
SEQF5003|JADGKG010000022.1
MBF0698445.1
Genome Viewer
NA
AA
885/295
6603-5719
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
SEQF5003|JADGKG010000022.1
MBF0698446.1
Genome Viewer
NA
AA
171/57
6853-7023
DUF3042 family protein
SEQF5003|JADGKG010000022.1
MBF0698447.1
Genome Viewer
NA
AA
558/186
8180-7623
flavin reductase
SEQF5003|JADGKG010000022.1
MBF0698448.1
Genome Viewer
NA
AA
1095/365
9279-8185
NADH-dependent flavin oxidoreductase
SEQF5003|JADGKG010000022.1
MBF0698449.1
Genome Viewer
NA
AA
573/191
9937-9365
histidine phosphatase family protein
Items 1 - 20
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* Click GI,UID,Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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