MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
STF.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 123
bases: 2,698,428 bps
CDS: 2,647
rRNA: 17
tRNA: 58
tmRNA: 1
Total number of protein coding genes annotated/found:
2,590
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 130 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5004|JADGKH010000102.1
MBF0704864.1
Genome Viewer
NA
AA
1005/335
21281-20277
autolysin/adhesin Aaa
SEQF5004|JADGKH010000112.1
MBF0704938.1
Genome Viewer
NA
AA
1929/643
11346-13274
ABC-F type ribosomal protection protein
SEQF5004|JADGKH010000050.1
MBF0703523.1
Genome Viewer
NA
AA
465/155
2567-2103
acetyl-CoA carboxylase biotin carboxyl carrier protein
SEQF5004|JADGKH010000050.1
MBF0703522.1
Genome Viewer
NA
AA
1356/452
2103-748
acetyl-CoA carboxylase biotin carboxylase subunit
SEQF5004|JADGKH010000051.1
MBF0703603.1
Genome Viewer
NA
AA
2706/902
38033-35328
aconitate hydratase AcnA
SEQF5004|JADGKH010000053.1
MBF0703706.1
Genome Viewer
NA
AA
1707/569
4761-6467
acetate--CoA ligase
SEQF5004|JADGKH010000022.1
MBF0702591.1
Genome Viewer
NA
AA
1548/516
52271-50724
zinc ABC transporter substrate-binding lipoprotein AdcA
SEQF5004|JADGKH010000029.1
MBF0702723.1
Genome Viewer
NA
AA
3654/1218
16644-12991
helicase-exonuclease AddAB subunit AddA
SEQF5004|JADGKH010000029.1
MBF0702724.1
Genome Viewer
NA
AA
3477/1159
20121-16645
helicase-exonuclease AddAB subunit AddB
SEQF5004|JADGKH010000043.1
MBF0703352.1
Genome Viewer
NA
AA
2610/870
58286-55677
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
SEQF5004|JADGKH010000014.1
MBF0702407.1
Genome Viewer
NA
AA
1011/337
7540-8550
alcohol dehydrogenase AdhP
SEQF5004|JADGKH010000042.1
MBF0703304.1
Genome Viewer
NA
AA
2319/773
273818-276136
LPXTG-anchored adenosine synthase AdsA
SEQF5004|JADGKH010000073.1
MBF0704244.1
Genome Viewer
NA
AA
570/190
14595-15164
peroxiredoxin
SEQF5004|JADGKH010000073.1
MBF0704245.1
Genome Viewer
NA
AA
1524/508
15180-16703
alkyl hydroperoxide reductase subunit F
SEQF5004|JADGKH010000040.1
MBF0703011.1
Genome Viewer
NA
AA
2631/877
70780-73410
alanine--tRNA ligase
SEQF5004|JADGKH010000052.1
MBF0703673.1
Genome Viewer
NA
AA
1119/373
79146-78028
alanine dehydrogenase
SEQF5004|JADGKH010000053.1
MBF0703733.1
Genome Viewer
NA
AA
1119/373
34396-35514
alanine dehydrogenase
SEQF5004|JADGKH010000058.1
MBF0703795.1
Genome Viewer
NA
AA
1149/383
8864-7716
alanine racemase
SEQF5004|JADGKH010000067.1
MBF0704099.1
Genome Viewer
NA
AA
1665/555
45761-44097
acetolactate synthase AlsS
SEQF5004|JADGKH010000067.1
MBF0704075.1
Genome Viewer
NA
AA
537/179
21222-20686
alkaline shock response membrane anchor protein AmaP
Items 1 - 20
🡆
click arrow to navigate by page or
of 130 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by