MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Shigella flexneri 19428wH2_1568

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from a total of 52 genomes

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NCBI Genome Annotation:

contigs: 237

bases: 5,139,722 bps

CDS: 5,034

rRNA: 13

tRNA: 87

tmRNA: 1

Total number of protein coding genes annotated/found: 4,833

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Molecule	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5015\|JADGKR010000143.1	MBF0743763.1	NA AA	317/105	317-1	aspartate/glutamate racemase family protein
SEQF5015\|JADGKR010000143.1	MBF0743764.1	NA AA	177/59	499-323	NCS1 family nucleobase:cation symporter-1
SEQF5015\|JADGKR010000051.1	MBF0743423.1	NA AA	240/80	2619-2858	hypothetical protein
SEQF5015\|JADGKR010000051.1	MBF0743424.1	NA AA	693/231	2855-3547	hemagglutinin
SEQF5015\|JADGKR010000051.1	MBF0743425.1	NA AA	390/130	3544-3933	hypothetical protein
SEQF5015\|JADGKR010000051.1	MBF0743426.1	NA AA	645/215	4164-4808	IS66 family insertion sequence hypothetical protein
SEQF5015\|JADGKR010000051.1	MBF0743427.1	NA AA	348/116	4805-5152	IS66 family insertion sequence element accessory protein TnpB
SEQF5015\|JADGKR010000051.1	MBF0743428.1	NA AA	1557/519	5172-6728	IS66 family transposase
SEQF5015\|JADGKR010000051.1	MBF0743429.1	NA AA	1023/341	6728-7750	hypothetical protein
SEQF5015\|JADGKR010000051.1	MBF0743430.1	NA AA	486/162	7747-8232	hypothetical protein
SEQF5015\|JADGKR010000051.1	MBF0743431.1	NA AA	495/165	8490-8984	hypothetical protein
SEQF5015\|JADGKR010000051.1	MBF0743432.1	NA AA	456/152	8989-9444	hypothetical protein
SEQF5015\|JADGKR010000051.1	MBF0743433.1	NA AA	258/86	9966-10223	hemagglutinin
SEQF5015\|JADGKR010000051.1	MBF0743434.1	NA AA	351/117	10229-10579	DUF596 domain-containing protein
SEQF5015\|JADGKR010000051.1	MBF0743435.1	NA AA	579/193	14853-15431	recombinase family protein
SEQF5015\|JADGKR010000051.1	MBF0743436.1	NA AA	273/91	15424-15696	arylsulfatase regulator
SEQF5015\|JADGKR010000051.1	MBF0743437.1	NA AA	420/140	16613-17032	Exc2 family lipoprotein
SEQF5015\|JADGKR010000051.1	MBF0743438.1	NA AA	354/118	17402-17755	hypothetical protein
SEQF5015\|JADGKR010000051.1	MBF0743439.1	NA AA	399/133	17767-18165	hypothetical protein
SEQF5015\|JADGKR010000051.1	MBF0743440.1	NA AA	378/126	19853-19476	GntR family transcriptional regulator

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Page last updated: July 7, 2021 08:39:35