MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Lactobacillus murinus LAC.1

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from a total of 52 genomes

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PROKKA Genome Annotation:

contigs: 225

bases: 2,084,440 bps

CDS: 1,985

rRNA: 10

Repeat region:

tmRNA: 1

tRNA: 63

misc RNA:

Total features: 2,059

Total number of protein coding genes annotated/found: 1,985

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5005\|JADGKI010000002.1	SEQF5005_00001	NA AA	1029/343	1219-191	hypothetical protein
SEQF5005\|JADGKI010000090.1	SEQF5005_00022	NA AA	741/247	122-862	hypothetical protein
SEQF5005\|JADGKI010000057.1	SEQF5005_00025	NA AA	525/175	628-104	hypothetical protein
SEQF5005\|JADGKI010000057.1	SEQF5005_00026	NA AA	1149/383	1769-621	hypothetical protein
SEQF5005\|JADGKI010000019.1	SEQF5005_00027	NA AA	651/217	108-758	IS30 family transposase IS1062
SEQF5005\|JADGKI010000019.1	SEQF5005_00029	NA AA	402/134	1688-1287	hypothetical protein
SEQF5005\|JADGKI010000019.1	SEQF5005_00030	NA AA	426/142	2202-1777	IS30 family transposase IS1062
SEQF5005\|JADGKI010000109.1	SEQF5005_00031	NA AA	636/212	31-666	hypothetical protein
SEQF5005\|JADGKI010000109.1	SEQF5005_00032	NA AA	396/132	681-1076	hypothetical protein
SEQF5005\|JADGKI010000109.1	SEQF5005_00033	NA AA	354/118	1161-1514	hypothetical protein
SEQF5005\|JADGKI010000043.1	SEQF5005_00034	NA AA	1656/552	31-1686	hypothetical protein
SEQF5005\|JADGKI010000001.1	SEQF5005_00035	NA AA	1251/417	1426-176	IS200/IS605 family transposase ISLjo5
SEQF5005\|JADGKI010000138.1	SEQF5005_00036	NA AA	240/80	585-346	hypothetical protein
SEQF5005\|JADGKI010000138.1	SEQF5005_00037	NA AA	195/65	794-600	hypothetical protein
SEQF5005\|JADGKI010000138.1	SEQF5005_00038	NA AA	657/219	1778-1122	hypothetical protein
SEQF5005\|JADGKI010000008.1	SEQF5005_00042	NA AA	138/46	3771-3634	hypothetical protein
SEQF5005\|JADGKI010000008.1	SEQF5005_00043	NA AA	435/145	3931-4365	Acetyltransferase
SEQF5005\|JADGKI010000008.1	SEQF5005_00048	NA AA	261/87	9279-9539	hypothetical protein
SEQF5005\|JADGKI010000008.1	SEQF5005_00049	NA AA	9531/3177	9776-19306	hypothetical protein
SEQF5005\|JADGKI010000008.1	SEQF5005_00053	NA AA	1743/581	23732-25474	putative ABC transporter ATP-binding/permease protein

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Page last updated: July 7, 2021 08:39:35