MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus arlettae
19428wH1_IOV5
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 80
bases: 2,607,375 bps
CDS: 2,506
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,580
Total number of protein coding genes annotated/found:
2,506
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5016|JADGMC010000045.1
SEQF5016_01734
Genome Viewer
NA
AA
675/225
404-1078
IS6 family transposase IS257-3
SEQF5016|JADGMC010000045.1
SEQF5016_01735
Genome Viewer
NA
AA
162/54
1175-1336
hypothetical protein
SEQF5016|JADGMC010000045.1
SEQF5016_01736
Genome Viewer
NA
AA
429/143
1358-1786
Acid shock protein
SEQF5016|JADGMC010000055.1
SEQF5016_01919
Genome Viewer
NA
AA
1038/346
1191-154
putative zinc-type alcohol dehydrogenase-like protein YdjJ
SEQF5016|JADGMC010000044.1
SEQF5016_01732
Genome Viewer
NA
AA
477/159
1059-583
hypothetical protein
SEQF5016|JADGMC010000044.1
SEQF5016_01733
Genome Viewer
NA
AA
735/245
2241-1507
rRNA adenine N-6-methyltransferase
SEQF5016|JADGMC010000003.1
SEQF5016_01539
Genome Viewer
NA
AA
759/253
924-166
Acetylglutamate kinase
SEQF5016|JADGMC010000003.1
SEQF5016_01540
Genome Viewer
NA
AA
1239/413
2173-935
Arginine biosynthesis bifunctional protein ArgJ
SEQF5016|JADGMC010000003.1
SEQF5016_01541
Genome Viewer
NA
AA
1032/344
3219-2188
N-acetyl-gamma-glutamyl-phosphate reductase
SEQF5016|JADGMC010000003.1
SEQF5016_01542
Genome Viewer
NA
AA
1197/399
4457-3261
Ornithine aminotransferase 2
SEQF5016|JADGMC010000003.1
SEQF5016_01543
Genome Viewer
NA
AA
1644/548
6565-4922
Aspartate-proton symporter
SEQF5016|JADGMC010000003.1
SEQF5016_01544
Genome Viewer
NA
AA
1398/466
8542-7145
Proline/betaine transporter
SEQF5016|JADGMC010000003.1
SEQF5016_01545
Genome Viewer
NA
AA
942/314
8796-9737
Non-specific ribonucleoside hydrolase RihC
SEQF5016|JADGMC010000003.1
SEQF5016_01546
Genome Viewer
NA
AA
108/36
10014-9907
hypothetical protein
SEQF5016|JADGMC010000003.1
SEQF5016_01547
Genome Viewer
NA
AA
1140/380
11342-10203
hypothetical protein
SEQF5016|JADGMC010000003.1
SEQF5016_01548
Genome Viewer
NA
AA
387/129
11824-11438
Aspartate 1-decarboxylase
SEQF5016|JADGMC010000003.1
SEQF5016_01549
Genome Viewer
NA
AA
855/285
12678-11824
Pantothenate synthetase
SEQF5016|JADGMC010000003.1
SEQF5016_01550
Genome Viewer
NA
AA
753/251
13435-12683
3-methyl-2-oxobutanoate hydroxymethyltransferase
SEQF5016|JADGMC010000003.1
SEQF5016_01551
Genome Viewer
NA
AA
867/289
13564-14430
2-dehydropantoate 2-reductase
SEQF5016|JADGMC010000003.1
SEQF5016_01552
Genome Viewer
NA
AA
1686/562
16240-14555
Oxygen-dependent choline dehydrogenase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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