MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Ligilactobacillus murinus
19428wF2_HT12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 193
bases: 2,276,358 bps
CDS: 2,234
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 61
misc RNA:
Total features: 2,305
Total number of protein coding genes annotated/found:
2,234
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 112 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5023|JADGME010000100.1
SEQF5023_00001
Genome Viewer
NA
AA
132/44
725-856
hypothetical protein
SEQF5023|JADGME010000100.1
SEQF5023_00002
Genome Viewer
NA
AA
108/36
980-1087
hypothetical protein
SEQF5023|JADGME010000100.1
SEQF5023_00003
Genome Viewer
NA
AA
195/65
1100-1294
hypothetical protein
SEQF5023|JADGME010000101.1
SEQF5023_00004
Genome Viewer
NA
AA
1212/404
13-1224
IS200/IS605 family transposase ISMmu1
SEQF5023|JADGME010000104.1
SEQF5023_00005
Genome Viewer
NA
AA
729/243
942-214
hypothetical protein
SEQF5023|JADGME010000105.1
SEQF5023_00006
Genome Viewer
NA
AA
576/192
650-75
hypothetical protein
SEQF5023|JADGME010000105.1
SEQF5023_00007
Genome Viewer
NA
AA
207/69
915-709
hypothetical protein
SEQF5023|JADGME010000106.1
SEQF5023_00008
Genome Viewer
NA
AA
819/273
863-45
IS3 family transposase ISEnfa5
SEQF5023|JADGME010000109.1
SEQF5023_00009
Genome Viewer
NA
AA
222/74
294-515
hypothetical protein
SEQF5023|JADGME010000109.1
SEQF5023_00010
Genome Viewer
NA
AA
276/92
512-787
hypothetical protein
SEQF5023|JADGME010000010.1
SEQF5023_00013
Genome Viewer
NA
AA
444/148
1928-2371
Putative universal stress protein
SEQF5023|JADGME010000010.1
SEQF5023_00014
Genome Viewer
NA
AA
525/175
2541-3065
hypothetical protein
SEQF5023|JADGME010000010.1
SEQF5023_00015
Genome Viewer
NA
AA
444/148
3282-3725
hypothetical protein
SEQF5023|JADGME010000010.1
SEQF5023_00016
Genome Viewer
NA
AA
1392/464
3985-5376
Fumarate reductase flavoprotein subunit
SEQF5023|JADGME010000010.1
SEQF5023_00017
Genome Viewer
NA
AA
1746/582
5527-7272
hypothetical protein
SEQF5023|JADGME010000010.1
SEQF5023_00019
Genome Viewer
NA
AA
774/258
7785-8558
hypothetical protein
SEQF5023|JADGME010000010.1
SEQF5023_00020
Genome Viewer
NA
AA
1734/578
8795-10528
putative ABC transporter ATP-binding protein
SEQF5023|JADGME010000010.1
SEQF5023_00021
Genome Viewer
NA
AA
1842/614
10528-12369
Fatty acid ABC transporter ATP-binding/permease protein
SEQF5023|JADGME010000010.1
SEQF5023_00025
Genome Viewer
NA
AA
138/46
15935-15798
hypothetical protein
SEQF5023|JADGME010000010.1
SEQF5023_00026
Genome Viewer
NA
AA
435/145
16095-16529
Acetyltransferase
Items 1 - 20
🡆
click arrow to navigate by page or
of 112 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by