MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Jeotgalicoccus nanhaiensis
19428wE5_W307
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 28
bases: 2,247,970 bps
CDS: 2,232
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,295
Total number of protein coding genes annotated/found:
2,232
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 112 pages
Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5028|JADGLW010000001.1
SEQF5028_00196
Genome Viewer
NA
AA
2820/940
2963-144
D-inositol-3-phosphate glycosyltransferase
SEQF5028|JADGLW010000001.1
SEQF5028_00197
Genome Viewer
NA
AA
906/302
3947-3042
Teichoic acids export ATP-binding protein TagH
SEQF5028|JADGLW010000001.1
SEQF5028_00198
Genome Viewer
NA
AA
810/270
4769-3960
Teichoic acid translocation permease protein TagG
SEQF5028|JADGLW010000001.1
SEQF5028_00199
Genome Viewer
NA
AA
1254/418
6107-4854
hypothetical protein
SEQF5028|JADGLW010000001.1
SEQF5028_00200
Genome Viewer
NA
AA
1230/410
7329-6100
GTPase HflX
SEQF5028|JADGLW010000001.1
SEQF5028_00201
Genome Viewer
NA
AA
486/162
7447-7932
Hydroperoxy fatty acid reductase gpx1
SEQF5028|JADGLW010000001.1
SEQF5028_00202
Genome Viewer
NA
AA
189/63
8158-7970
RNA-binding protein Hfq
SEQF5028|JADGLW010000001.1
SEQF5028_00203
Genome Viewer
NA
AA
909/303
9067-8159
tRNA dimethylallyltransferase
SEQF5028|JADGLW010000001.1
SEQF5028_00204
Genome Viewer
NA
AA
885/295
9938-9054
hypothetical protein
SEQF5028|JADGLW010000001.1
SEQF5028_00205
Genome Viewer
NA
AA
1851/617
11800-9950
DNA mismatch repair protein MutL
SEQF5028|JADGLW010000001.1
SEQF5028_00206
Genome Viewer
NA
AA
2541/847
14344-11804
DNA mismatch repair protein MutS
SEQF5028|JADGLW010000001.1
SEQF5028_00207
Genome Viewer
NA
AA
588/196
14984-14397
hypothetical protein
SEQF5028|JADGLW010000001.1
SEQF5028_00208
Genome Viewer
NA
AA
435/145
15813-15379
putative protein YmcA
SEQF5028|JADGLW010000001.1
SEQF5028_00209
Genome Viewer
NA
AA
1818/606
17923-16106
putative ABC transporter ATP-binding protein
SEQF5028|JADGLW010000001.1
SEQF5028_00210
Genome Viewer
NA
AA
1722/574
19637-17916
putative ABC transporter ATP-binding protein
SEQF5028|JADGLW010000001.1
SEQF5028_00211
Genome Viewer
NA
AA
759/253
20598-19840
2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase
SEQF5028|JADGLW010000001.1
SEQF5028_00212
Genome Viewer
NA
AA
975/325
21867-20893
hypothetical protein
SEQF5028|JADGLW010000001.1
SEQF5028_00213
Genome Viewer
NA
AA
1560/520
24123-22564
Ribonuclease Y
SEQF5028|JADGLW010000001.1
SEQF5028_00214
Genome Viewer
NA
AA
1062/354
25354-24293
Protein RecA
SEQF5028|JADGLW010000001.1
SEQF5028_00215
Genome Viewer
NA
AA
585/195
26110-25526
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Items 1 - 20
🡆
click arrow to navigate by page or
of 112 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
