MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Muribacter muris
19428wC3_WT12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 94
bases: 2,526,693 bps
CDS: 2,443
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 49
misc RNA:
Total features: 2,502
Total number of protein coding genes annotated/found:
2,443
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5037|JADGLC010000019.1
SEQF5037_00609
Genome Viewer
NA
AA
663/221
435-1097
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00610
Genome Viewer
NA
AA
1803/601
1281-3083
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00611
Genome Viewer
NA
AA
1065/355
3414-4478
Uroporphyrinogen decarboxylase
SEQF5037|JADGLC010000019.1
SEQF5037_00612
Genome Viewer
NA
AA
591/197
4489-5079
putative protein
SEQF5037|JADGLC010000019.1
SEQF5037_00613
Genome Viewer
NA
AA
273/91
5213-5485
DNA-binding protein HU-alpha
SEQF5037|JADGLC010000019.1
SEQF5037_00614
Genome Viewer
NA
AA
1083/361
5646-6728
Peptide chain release factor RF1
SEQF5037|JADGLC010000019.1
SEQF5037_00615
Genome Viewer
NA
AA
1251/417
6800-8050
Release factor glutamine methyltransferase
SEQF5037|JADGLC010000019.1
SEQF5037_00616
Genome Viewer
NA
AA
849/283
8038-8886
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00617
Genome Viewer
NA
AA
189/63
8894-9082
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00618
Genome Viewer
NA
AA
855/285
9185-10039
2-dehydro-3-deoxyphosphooctonate aldolase
SEQF5037|JADGLC010000019.1
SEQF5037_00619
Genome Viewer
NA
AA
948/316
10145-11092
Putative 2-hydroxyacid dehydrogenase
SEQF5037|JADGLC010000019.1
SEQF5037_00620
Genome Viewer
NA
AA
1182/394
11185-12366
Lipoprotein-releasing system transmembrane protein LolC
SEQF5037|JADGLC010000019.1
SEQF5037_00621
Genome Viewer
NA
AA
648/216
12359-13006
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00622
Genome Viewer
NA
AA
507/169
13026-13532
Peptide methionine sulfoxide reductase MsrA/MsrB
SEQF5037|JADGLC010000019.1
SEQF5037_00623
Genome Viewer
NA
AA
393/131
14150-13758
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00624
Genome Viewer
NA
AA
744/248
14282-15025
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00625
Genome Viewer
NA
AA
669/223
15044-15712
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00626
Genome Viewer
NA
AA
1242/414
15754-16995
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00627
Genome Viewer
NA
AA
1080/360
18234-17155
Sodium-potassium/proton antiporter ChaA
SEQF5037|JADGLC010000019.1
SEQF5037_00628
Genome Viewer
NA
AA
1299/433
19555-18257
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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