MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Rothia nasimurium
19428wA5_irhom_31
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 127
bases: 2,688,339 bps
CDS: 2,489
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,551
Total number of protein coding genes annotated/found:
2,489
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5043|JADGLK010000009.1
SEQF5043_02551
Genome Viewer
NA
AA
3702/1234
66447-70148
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02550
Genome Viewer
NA
AA
414/138
65853-66266
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02549
Genome Viewer
NA
AA
666/222
65005-65670
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02548
Genome Viewer
NA
AA
651/217
64845-64195
Iron-sulfur cluster carrier protein
SEQF5043|JADGLK010000009.1
SEQF5043_02547
Genome Viewer
NA
AA
312/104
64195-63884
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02546
Genome Viewer
NA
AA
483/161
63838-63356
Single-stranded DNA-binding protein
SEQF5043|JADGLK010000009.1
SEQF5043_02545
Genome Viewer
NA
AA
366/122
63324-62959
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02544
Genome Viewer
NA
AA
510/170
62774-62265
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02543
Genome Viewer
NA
AA
5679/1893
62253-56575
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02542
Genome Viewer
NA
AA
357/119
56355-55999
Putative toxin HigB2
SEQF5043|JADGLK010000009.1
SEQF5043_02541
Genome Viewer
NA
AA
312/104
55994-55683
Putative antitoxin HigA2
SEQF5043|JADGLK010000009.1
SEQF5043_02540
Genome Viewer
NA
AA
339/113
55636-55298
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02539
Genome Viewer
NA
AA
426/142
54884-54459
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02538
Genome Viewer
NA
AA
333/111
54052-54384
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02537
Genome Viewer
NA
AA
288/96
53775-54062
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02536
Genome Viewer
NA
AA
411/137
52805-53215
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02535
Genome Viewer
NA
AA
5127/1709
52033-46907
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02534
Genome Viewer
NA
AA
276/92
46457-46732
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02533
Genome Viewer
NA
AA
264/88
46197-46460
hypothetical protein
SEQF5043|JADGLK010000009.1
SEQF5043_02532
Genome Viewer
NA
AA
501/167
45586-46086
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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