MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Rothia nasimurium
19428wA5_irhom_31
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 127
bases: 2,688,339 bps
CDS: 2,489
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,551
Total number of protein coding genes annotated/found:
2,489
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5043|JADGLK010000056.1
SEQF5043_01949
Genome Viewer
NA
AA
222/74
1-222
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00067
Genome Viewer
NA
AA
558/186
5-562
Aspartate carbamoyltransferase
SEQF5043|JADGLK010000013.1
SEQF5043_00194
Genome Viewer
NA
AA
222/74
13-234
hypothetical protein
SEQF5043|JADGLK010000075.1
SEQF5043_02283
Genome Viewer
NA
AA
1203/401
22-1224
hypothetical protein
SEQF5043|JADGLK010000014.1
SEQF5043_00242
Genome Viewer
NA
AA
864/288
26-889
hypothetical protein
SEQF5043|JADGLK010000101.1
SEQF5043_00003
Genome Viewer
NA
AA
840/280
28-867
hypothetical protein
SEQF5043|JADGLK010000096.1
SEQF5043_02488
Genome Viewer
NA
AA
435/145
34-468
hypothetical protein
SEQF5043|JADGLK010000030.1
SEQF5043_01199
Genome Viewer
NA
AA
1203/401
38-1240
hypothetical protein
SEQF5043|JADGLK010000040.1
SEQF5043_01568
Genome Viewer
NA
AA
756/252
39-794
putative protein
SEQF5043|JADGLK010000088.1
SEQF5043_02400
Genome Viewer
NA
AA
483/161
47-529
Cysteine--tRNA ligase
SEQF5043|JADGLK010000036.1
SEQF5043_01373
Genome Viewer
NA
AA
1542/514
49-1590
putative sensor histidine kinase pdtaS
SEQF5043|JADGLK010000019.1
SEQF5043_00521
Genome Viewer
NA
AA
1809/603
51-1859
Carbamoyl-phosphate synthase large chain
SEQF5043|JADGLK010000091.1
SEQF5043_02480
Genome Viewer
NA
AA
1017/339
63-1079
Putative transport protein
SEQF5043|JADGLK010000097.1
SEQF5043_02490
Genome Viewer
NA
AA
321/107
72-392
Insertion element IS6110 uncharacterized 12.0 kDa protein
SEQF5043|JADGLK010000022.1
SEQF5043_00789
Genome Viewer
NA
AA
171/57
74-244
hypothetical protein
SEQF5043|JADGLK010000086.1
SEQF5043_02396
Genome Viewer
NA
AA
267/89
79-345
hypothetical protein
SEQF5043|JADGLK010000018.1
SEQF5043_00477
Genome Viewer
NA
AA
543/181
93-635
hypothetical protein
SEQF5043|JADGLK010000049.1
SEQF5043_01733
Genome Viewer
NA
AA
1122/374
94-1215
Enterochelin esterase
SEQF5043|JADGLK010000012.1
SEQF5043_00125
Genome Viewer
NA
AA
198/66
96-293
hypothetical protein
SEQF5043|JADGLK010000042.1
SEQF5043_01615
Genome Viewer
NA
AA
2094/698
103-2196
DNA gyrase subunit B
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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