MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Ligilactobacillus murinus 2_2BalbC1BO2_S2

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from a total of 52 genomes

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PROKKA Genome Annotation:

contigs: 224

bases: 2,332,310 bps

CDS: 2,313

rRNA: 6

Repeat region:

tmRNA: 1

tRNA: 61

misc RNA:

Total features: 2,381

Total number of protein coding genes annotated/found: 2,313

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Molecule ^	PID/GenBank ID *	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5054\|JADGLU010000216.1	SEQF5054_02376	NA AA	1428/476	5832-7259	Aryl-phospho-beta-D-glucosidase BglC
SEQF5054\|JADGLU010000216.1	SEQF5054_02375	NA AA	687/229	5715-5029	putative HTH-type transcriptional regulator YydK
SEQF5054\|JADGLU010000216.1	SEQF5054_02374	NA AA	267/89	4682-4416	hypothetical protein
SEQF5054\|JADGLU010000216.1	SEQF5054_02373	NA AA	426/142	3695-3270	hypothetical protein
SEQF5054\|JADGLU010000216.1	SEQF5054_02372	NA AA	426/142	3173-2748	hypothetical protein
SEQF5054\|JADGLU010000216.1	SEQF5054_02371	NA AA	117/39	2666-2550	hypothetical protein
SEQF5054\|JADGLU010000216.1	SEQF5054_02370	NA AA	435/145	1935-2369	IS30 family transposase IS1062
SEQF5054\|JADGLU010000216.1	SEQF5054_02369	NA AA	459/153	1398-1856	IS30 family transposase IS1252
SEQF5054\|JADGLU010000216.1	SEQF5054_02368	NA AA	252/84	482-733	hypothetical protein
SEQF5054\|JADGLU010000213.1	SEQF5054_02362	NA AA	267/89	8128-7862	hypothetical protein
SEQF5054\|JADGLU010000213.1	SEQF5054_02361	NA AA	216/72	7843-7628	hypothetical protein
SEQF5054\|JADGLU010000213.1	SEQF5054_02360	NA AA	747/249	7538-6792	Putative glutamine amidotransferase
SEQF5054\|JADGLU010000213.1	SEQF5054_02359	NA AA	1017/339	5722-6738	Alcohol dehydrogenase 1
SEQF5054\|JADGLU010000213.1	SEQF5054_02358	NA AA	1368/456	4177-5544	Glutathione biosynthesis bifunctional protein GshAB
SEQF5054\|JADGLU010000213.1	SEQF5054_02357	NA AA	636/212	3891-3256	hypothetical protein
SEQF5054\|JADGLU010000213.1	SEQF5054_02356	NA AA	315/105	3164-2850	Thioredoxin
SEQF5054\|JADGLU010000213.1	SEQF5054_02355	NA AA	927/309	2831-1905	Thioredoxin reductase
SEQF5054\|JADGLU010000213.1	SEQF5054_02354	NA AA	180/60	1680-1859	hypothetical protein
SEQF5054\|JADGLU010000213.1	SEQF5054_02353	NA AA	1365/455	1441-77	H(+)/Cl(-) exchange transporter ClcA
SEQF5054\|JADGLU010000212.1	SEQF5054_02352	NA AA	378/126	30436-30813	hypothetical protein

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Page last updated: July 7, 2021 08:39:35