MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Ligilactobacillus murinus
2_2BalbC1BO2_S2
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 224
bases: 2,332,310 bps
CDS: 2,313
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 61
misc RNA:
Total features: 2,381
Total number of protein coding genes annotated/found:
2,313
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5054|JADGLU010000209.1
SEQF5054_02294
Genome Viewer
NA
AA
90/30
1969-1880
hypothetical protein
SEQF5054|JADGLU010000068.1
SEQF5054_00761
Genome Viewer
NA
AA
93/31
31480-31388
hypothetical protein
SEQF5054|JADGLU010000068.1
SEQF5054_00765
Genome Viewer
NA
AA
96/32
32494-32399
hypothetical protein
SEQF5054|JADGLU010000174.1
SEQF5054_01915
Genome Viewer
NA
AA
96/32
157-62
hypothetical protein
SEQF5054|JADGLU010000062.1
SEQF5054_00619
Genome Viewer
NA
AA
102/34
8734-8835
hypothetical protein
SEQF5054|JADGLU010000113.1
SEQF5054_01276
Genome Viewer
NA
AA
102/34
21681-21782
hypothetical protein
SEQF5054|JADGLU010000127.1
SEQF5054_01315
Genome Viewer
NA
AA
102/34
11449-11550
hypothetical protein
SEQF5054|JADGLU010000127.1
SEQF5054_01320
Genome Viewer
NA
AA
102/34
14115-14216
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01659
Genome Viewer
NA
AA
102/34
37738-37637
hypothetical protein
SEQF5054|JADGLU010000068.1
SEQF5054_00750
Genome Viewer
NA
AA
105/35
27419-27315
hypothetical protein
SEQF5054|JADGLU010000032.1
SEQF5054_00276
Genome Viewer
NA
AA
108/36
222-329
hypothetical protein
SEQF5054|JADGLU010000068.1
SEQF5054_00746
Genome Viewer
NA
AA
108/36
25916-25809
hypothetical protein
SEQF5054|JADGLU010000127.1
SEQF5054_01317
Genome Viewer
NA
AA
108/36
12055-12162
hypothetical protein
SEQF5054|JADGLU010000129.1
SEQF5054_01336
Genome Viewer
NA
AA
114/38
12357-12244
50S ribosomal protein L36
SEQF5054|JADGLU010000011.1
SEQF5054_00129
Genome Viewer
NA
AA
117/39
19414-19530
hypothetical protein
SEQF5054|JADGLU010000137.1
SEQF5054_01494
Genome Viewer
NA
AA
117/39
7239-7355
hypothetical protein
SEQF5054|JADGLU010000216.1
SEQF5054_02371
Genome Viewer
NA
AA
117/39
2666-2550
hypothetical protein
SEQF5054|JADGLU010000034.1
SEQF5054_00311
Genome Viewer
NA
AA
120/40
38801-38682
hypothetical protein
SEQF5054|JADGLU010000079.1
SEQF5054_00960
Genome Viewer
NA
AA
120/40
63825-63944
hypothetical protein
SEQF5054|JADGLU010000167.1
SEQF5054_01883
Genome Viewer
NA
AA
120/40
51216-51335
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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