MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Pasteurella sp.
19428wF3_WM03
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 32
bases: 2,266,646 bps
CDS: 2,131
rRNA: 11
tRNA: 51
tmRNA: 1
Total number of protein coding genes annotated/found:
2,077
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5022|JADGKV010000001.1
MBF0750653.1
Genome Viewer
NA
AA
1335/445
114364-115698
argininosuccinate synthase
SEQF5022|JADGKV010000007.1
MBF0752078.1
Genome Viewer
NA
AA
1374/458
37835-39208
argininosuccinate lyase
SEQF5022|JADGKV010000002.1
MBF0750982.1
Genome Viewer
NA
AA
453/151
19751-19299
transcriptional regulator ArgR
SEQF5022|JADGKV010000002.1
MBF0751294.1
Genome Viewer
NA
AA
1734/578
368550-370283
arginine--tRNA ligase
SEQF5022|JADGKV010000004.1
MBF0751723.1
Genome Viewer
NA
AA
1299/433
170641-169343
3-phosphoshikimate 1-carboxyvinyltransferase
SEQF5022|JADGKV010000001.1
MBF0750799.1
Genome Viewer
NA
AA
1089/363
265929-264841
3-dehydroquinate synthase
SEQF5022|JADGKV010000008.1
MBF0752162.1
Genome Viewer
NA
AA
1074/358
23146-24219
chorismate synthase
SEQF5022|JADGKV010000006.1
MBF0751998.1
Genome Viewer
NA
AA
819/273
124013-124831
shikimate dehydrogenase
SEQF5022|JADGKV010000010.1
MBF0752381.1
Genome Viewer
NA
AA
1065/355
53516-54580
3-deoxy-7-phosphoheptulonate synthase AroG
SEQF5022|JADGKV010000001.1
MBF0750800.1
Genome Viewer
NA
AA
543/181
266490-265948
shikimate kinase AroK
SEQF5022|JADGKV010000001.1
MBF0750762.1
Genome Viewer
NA
AA
453/151
217772-217320
type II 3-dehydroquinate dehydratase
SEQF5022|JADGKV010000003.1
MBF0751420.1
Genome Viewer
NA
AA
351/117
132148-131798
arsenate reductase (glutaredoxin)
SEQF5022|JADGKV010000005.1
MBF0751856.1
Genome Viewer
NA
AA
684/228
148018-147335
arginine ABC transporter permease ArtM
SEQF5022|JADGKV010000005.1
MBF0751859.1
Genome Viewer
NA
AA
732/244
150153-149422
arginine ABC transporter ATP-binding protein ArtP
SEQF5022|JADGKV010000005.1
MBF0751857.1
Genome Viewer
NA
AA
666/222
148683-148018
arginine ABC transporter permease ArtQ
SEQF5022|JADGKV010000009.1
MBF0752272.1
Genome Viewer
NA
AA
1116/372
30186-31301
aspartate-semialdehyde dehydrogenase
SEQF5022|JADGKV010000009.1
MBF0752254.1
Genome Viewer
NA
AA
453/151
6021-6473
transcriptional regulator AsnC
SEQF5022|JADGKV010000002.1
MBF0750979.1
Genome Viewer
NA
AA
1404/468
16735-15332
asparagine--tRNA ligase
SEQF5022|JADGKV010000003.1
MBF0751517.1
Genome Viewer
NA
AA
1419/473
225726-227144
aspartate ammonia-lyase
SEQF5022|JADGKV010000007.1
MBF0752074.1
Genome Viewer
NA
AA
1767/589
32479-34245
aspartate--tRNA ligase
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Items 21 - 40
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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