MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Providencia alcalifaciens
WMus003.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 66
bases: 3,919,227 bps
CDS: 3,576
rRNA: 12
Repeat region:
tmRNA: 1
tRNA: 80
misc RNA:
Total features: 3,669
Total number of protein coding genes annotated/found:
3,576
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5002|JADGLZ010000001.1
SEQF5002_00684
Genome Viewer
NA
AA
279/93
7-285
hypothetical protein
SEQF5002|JADGLZ010000008.1
SEQF5002_03287
Genome Viewer
NA
AA
234/78
65-298
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00001
Genome Viewer
NA
AA
126/42
66-191
hypothetical protein
SEQF5002|JADGLZ010000016.1
SEQF5002_00609
Genome Viewer
NA
AA
189/63
141-329
hypothetical protein
SEQF5002|JADGLZ010000020.1
SEQF5002_01424
Genome Viewer
NA
AA
495/165
189-683
hypothetical protein
SEQF5002|JADGLZ010000001.1
SEQF5002_00685
Genome Viewer
NA
AA
594/198
288-881
hypothetical protein
SEQF5002|JADGLZ010000013.1
SEQF5002_00424
Genome Viewer
NA
AA
267/89
334-600
hypothetical protein
SEQF5002|JADGLZ010000036.1
SEQF5002_01868
Genome Viewer
NA
AA
363/121
369-7
hypothetical protein
SEQF5002|JADGLZ010000014.1
SEQF5002_00503
Genome Viewer
NA
AA
429/143
503-931
hypothetical protein
SEQF5002|JADGLZ010000015.1
SEQF5002_00558
Genome Viewer
NA
AA
1035/345
561-1595
UDP-N-acetylenolpyruvoylglucosamine reductase
SEQF5002|JADGLZ010000016.1
SEQF5002_00610
Genome Viewer
NA
AA
645/215
587-1231
hypothetical protein
SEQF5002|JADGLZ010000006.1
SEQF5002_02767
Genome Viewer
NA
AA
1047/349
625-1671
Dihydroorotase
SEQF5002|JADGLZ010000017.1
SEQF5002_00646
Genome Viewer
NA
AA
552/184
648-97
hypothetical protein
SEQF5002|JADGLZ010000008.1
SEQF5002_03288
Genome Viewer
NA
AA
276/92
705-980
hypothetical protein
SEQF5002|JADGLZ010000013.1
SEQF5002_00425
Genome Viewer
NA
AA
363/121
716-1078
hypothetical protein
SEQF5002|JADGLZ010000002.1
SEQF5002_01455
Genome Viewer
NA
AA
450/150
775-326
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00002
Genome Viewer
NA
AA
930/310
794-1723
Homoserine O-succinyltransferase
SEQF5002|JADGLZ010000030.1
SEQF5002_01864
Genome Viewer
NA
AA
762/254
836-75
Chaperone protein caf1M
SEQF5002|JADGLZ010000007.1
SEQF5002_03022
Genome Viewer
NA
AA
324/108
840-517
hypothetical protein
SEQF5002|JADGLZ010000001.1
SEQF5002_00686
Genome Viewer
NA
AA
582/194
881-1462
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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